Part of the regional summary: Kenya

Lower Mpunguti-site 2 is a densely covered reef flat where nearly everything was found bleached at once — continuous corymbose Acropora thickets gone bone-white to the branch tips, and even massive Porites domes (normally the growth form that holds on best) whitened over their entire surface. A mound of ruffled leather soft corals was found paling too, alongside two giant clams set into the rock. Published cover was 34%, with 82% of coral tissue bleached.
Lower Mpunguti-site 2 ni tambarare ya mwamba iliyofunikwa kwa wingi ambapo karibu kila kitu kilikutwa kimepauka kwa wakati mmoja - vichaka endelevu vya Acropora ya korimbosi vimekuwa vyeupe kama mfupa hadi ncha za matawi, na hata kuba kubwa za Porites (kwa kawaida umbo la ukuaji linalostahimili zaidi) zimepauka juu ya uso wao wote. Kilima cha matumbawe laini ya ngozi yenye mikunjo kilikutwa kikififia pia, kando ya kome wakubwa wawili waliokaa ndani ya mwamba. Ufunikaji uliochapishwa ulikuwa 34%, huku 82% ya tishu za matumbawe zikiwa zimepauka.
Tafsiri ya muhtasari huu kwa AI; Kiingereza ndicho kinachotumika rasmi.
27 independent survey stations shown with the program’s logo — click one to see how far it is from this site.
Seven other CRD dive sites with their own pages within 5 km shown in orange — click a marker to open its page.
4 of the 16 photographs on this page are shown beside the text that discusses them under "Site description" below.
The set is a shallow, sunlit reef flat, and most frames are shot straight down or at a low oblique onto it — sun banding is visible across the pavement in a third of them and there is no blue-water horizon anywhere in the sequence. Water is green-tinged and visibility moderate, well short of the clear blue at Coral Garden or Kisite site 4.
Frame by frame, this is a genuinely dense flat and an almost completely bleached one. The signature of the site is fine-branched corymbose Acropora growing as continuous multi-colony thickets rather than scattered heads: four consecutive frames near the end of the run are filled corner to corner with such thickets, every colony blanched to a uniform bone-white or pale lilac-white down to the branch tips, the individual rosettes still structurally intact with no algal overgrowth yet — recent bleaching, not old mortality (e.g., Image 4).
One frame is the best overhead record of the flat itself: near-total substrate occupancy, with mauve-purple foliose and encrusting plate colonies whose lobed margins have blanched white, yellow-green pocilloporid and small knobby colonies packed between them, coralline-crusted pavement filling the gaps — and at least two giant clams (Tridacna) set into the rock, the larger showing a thick, brilliant white fluted shell margin around a dark gape, a smaller one showing a green-mottled, apparently pigmented mantle (e.g., Image 1).
One frame stands apart. It is a low mound carpeted almost entirely in ruffled, cabbage-like leather soft corals (Sarcophyton/Lobophytum type) — dozens of colonies packed shoulder to shoulder across the whole rise, all a uniform pale cream-yellow rather than the usual olive-khaki — sitting over a dark rust-red algal turf, with small white branching Acropora dotted on the rock below (e.g., Image 3).
Algae are the other constant. Rust-red and olive fleshy fronds and dense filamentous green canopy blanket the pavement between coral stands in most frames, and one is almost nothing but that canopy over pale rock.
In one of the four bone-white thicket frames a single small pinkish-brown pigmented colony sits in the middle of that white field and is the only colored thing in the frame. Another frame shows the same growth form at wider scale: several distinct corymbose and tabular stands separated by sand and turf channels, grading from olive-yellow (pigmented) through pale gray-lilac to white across a few meters of reef. The massive corals — normally the growth form that holds on — did not here. Two frames capture the same pair of large nodular Porites-type domes, each roughly a meter across, one chalk-white and the other pale lilac-pink, both whitened over the entire colony surface with no pigmented margin left, standing on sand and green turf. Another frame has a second such pair overhead: a cream-white ridged dome beside a very pale lavender colony with one small turf-covered dead patch; the dark lines across it are the valleys between its lobes (shading and sediment), not tissue loss. Further pale nodular domes recur in two frames. One frame is the exception and the most informative single image on pattern: a large olive-brown digitate Acropora bommie that has kept most of its pigment but carries a stark snow-white bleached patch across its crown — partial-colony bleaching within one stand, alongside a cream-tan massive dome and pale gray digitate colonies. Another frame repeats that mosaic with the pale lilac-white and cream colonies dominant and olive-brown patches surviving between them (e.g., Image 2).
Soft corals were paling here alongside the stony corals, and they are not counted in the hard coral figure. Typical recent thermal stress: mean annual maximum of 4.9 degree heating weeks (2021-2025, NOAA CRW; Kenya virtual station).
Fish are sparse: a pair of sergeant majors over a bleached tabular colony in one frame, scattered damselfish, small dark fish working the thickets. No large aggregation, no turtle, no ray, no crown-of-thorns, and no lesion or band suggesting disease anywhere in the 27 frames reviewed.
REEFolution Foundation surveyed a station named Lower Mpunguti, 0.59 km away. Within 5 km, 26 independent stations recorded hard coral cover between 2008 and 2024: ten by benthic survey, station-year means of 0.0–66%, and sixteen by MERMAID bleaching-protocol quadrats, station-year means of 18–56%; the nearest, REEFolution Foundation at Lower Mpunguti, 0.59 km away, read 0.0–8.0% between 2017 and 2019.
Surveyed 21 Mar 2024 in Kisite-Mpunguti Marine Protected Area during the 2024 Western Indian Ocean mass bleaching event — the eighth and last reef of the Shimoni run, shot 22 minutes end to end immediately after the neighboring Lower Mpunguti site. Surveys were run with REEFolution.
| Method | Hard coral cover (%) | Photos (n) ± SE |
|---|---|---|
| Manual (published) | 34.2 | |
| CoralNet (published survey's own annotation) | 34.2 | n = 27 |
| In-house DINOv3 | 42.6 | n = 27 |
| CoralSCOP unedited | 16.9 | n = 27 |
The three computer-vision methods disagree by 25.7 pp (16.9–42.6%) and read on both sides of the manual point count (34.2%); the headline is the manual point count because a person's point count of the site's photographs is the reference the models are measured against.
See a more detailed, stand-alone version of this table.
| Agency / program | Year(s) | Stations / distance | Link |
|---|---|---|---|
| McClanahan et al. (1996) | 1996 | 1 station, 4.79 km | Records ↓ |
| REEFolution Foundation | 2017–2023 | 9 stations, 0.59–4.91 km | Records ↓ |
| submitted to MERMAID by Kosgei J, Musembi P.* (MERMAID bleaching-protocol quadrats) | 2024 | 2 stations, 2.86–4.89 km | Records ↓ |
| WCS Kenya / WCS Tanzania via MERMAID | 2020 | 1 station, 2.61 km | Records ↓ |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | 2008–2019 | 14 stations, 2.26–4.53 km | Records ↓ |
Coral Reef DiagnosticsYear-average (illustrative only, programs differ; quadrats left out)Within 5 km, 26 independent survey stations recorded hard coral cover in 164 surveys between 2008 and 2024. Of the 9 stations with benthic surveys in more than one year, 4 declined (by 2.4–23 points) and 5 increased (by 1.0–27 points) between their first and latest surveys. Three stations share the longest span (2018–2023); one, Kikuyu House (REEFolution Foundation, 2.92 km away), went from 31% in 2018 (mean of 9 surveys) to 23% in 2023 (mean of 2 surveys). With MERMAID bleaching-protocol quadrats, of the 3 stations surveyed in more than one year, 3 increased (by 3.0–9.0 points) between their first and latest surveys. Since 2021, station-year means excluding quadrats average 34% (range 4.9–66%; n = 6 station-years from 14 surveys). Quadrats since 2021 read 36–55% (n = 2 station-years). This site's own estimate (34%) sits 26.0 points above the range of these station-year means up to 2 km away (0.0–8.0%); the methods differ, so the comparison is context, not a like-for-like test. One further row in the table has no survey date, so it is listed but not part of this summary.
Collected by other programs using different methods (MERMAID is a data platform: each MERMAID row names the organization that did the survey, and its method is in the row's hover text. *Conducted by citizen scientists), so these are context for the figures above, not a like-for-like comparison. Where a station was surveyed more than once, the cell shows either the range of its values or, as a single value, the mean of surveys made in one year. Station names are not dive-site names.
| Agency | Site / location | Date | Hard coral cover (%) | Distance | Link |
|---|---|---|---|---|---|
| McClanahan et al. (1996) | Kisite Island | by 1996 (published) | 27% (2 records) | 4.79 km | doi:10.1046/j.1523-1739.1996.10010136.x |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite | 2008–2009 | 37–46% (2 surveys) | 4.13 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite South of Site 1 | 2010 | 56% | 3.84 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Waga | 2011 | 25% | 3.95 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Waga 2 | 2011 | 25% | 3.95 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite 1 | 2012–2016 | 44–48% (3 surveys) | 4.13 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite 2 | 2012–2015 | 44–52% (2 surveys) | 4.53 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite Edge 1 | 2013 | 42% | 4.03 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Jiwe la kale East | 2014 | 25% | 2.77 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Mji wa Kale 2 (Mkwiro) | 2015 | 20% | 2.85 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Mji wa Kale 1 (Mkwiro) | 2015 | 18% | 2.97 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Mpunguti | 2016 | 32% | 2.26 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite corner | 2016 | 50% | 4.03 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| REEFolution Foundation | Lower Mpunguti | 2017–2019 | 0.0–8.0% (range of yearly means; 15 surveys) | 0.59 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Dolphin Point | 2017–2019 | 20–41% (range of yearly means; 14 surveys) | 3.13 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Outer Kisite | 2017–2019 | 39–53% (range of yearly means; 13 surveys) | 3.80 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | House Reef Firefly | 2017–2021 | 39–66% (range of yearly means; 21 surveys) | 3.88 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Kisite 2 | 2017–2018 | 29–48% (range of yearly means; 3 surveys) | 4.53 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Kikuyu House | 2018–2023 | 23–31% (range of yearly means; 24 surveys) | 2.92 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Mkwiro CMA | 2018–2023 | 29–37% (range of yearly means; 7 surveys) | 2.97 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Pilli Pipa Restaurant | 2018–2023 | 4.9–56% (range of yearly means; 31 surveys) | 3.38 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Wasini Tengefu | 2018–2019 | 52–59% (range of yearly means; 15 surveys) | 4.91 km | 2023. REEFolution Kenya. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Mji wa Kale 2 (Mkwiro) | 2019 | 24% | 2.85 km | Darling E, Kosgei J, McClanahan T, Muthiga N. 2019. Kenya MACMON 2016-17. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Mji wa Kale 1 (Mkwiro) | 2019 | 33% | 2.97 km | Darling E, Kosgei J, McClanahan T, Muthiga N. 2019. Kenya MACMON 2016-17. MERMAID |
| WCS Kenya / WCS Tanzania via MERMAID | Mkwiro | 2020 | 29% | 2.61 km | Darling E, Mensa J, O'Leary J, Schwarz A. 2020. BAF 1 - 2020. MERMAID |
| submitted to MERMAID by Kosgei J, Musembi P.* (MERMAID bleaching-protocol quadrats) | Mji wa Kale 1 (Mkwiro) | 2024 | 36% | 2.86 km | Kosgei J, Musembi P. 2024. KenyaBleachingSurveys_2024. MERMAID |
| submitted to MERMAID by Kosgei J, Musembi P.* (MERMAID bleaching-protocol quadrats) | Wasini | 2024 | 55% | 4.89 km | Kosgei J, Musembi P. 2024. KenyaBleachingSurveys_2024. MERMAID |
All images from Coral Reef Diagnostics. Data are from Coral Reef Diagnostics and the organizations named in the data sources above.
© Coral Reef Diagnostics.