Part of the regional summary: Kenya

Kisite site 4 combined high coral cover (46%) with near-total bleaching (89% of tissue) — a shallow coral garden dominated by dense knobby Galaxea sheets that read as a white 'snowfield' across entire hillsides, though close-up frames show some colonies retain pigmented polyp centers even when they look fully white from a distance. A crown-of-thorns starfish was photographed directly on bleached coral here, and a scattering of colonies — an olive-and-gold branching bommie, salmon-orange knobby corals — held full color as clear exceptions.
Kisite site 4 iliunganisha ufunikaji mkubwa wa matumbawe (46%) na upaukaji karibu kamili (89% ya tishu) - bustani ya matumbawe ya kina kifupi inayotawaliwa na tabaka mnene za Galaxea zenye vifundo zinazoonekana kama 'uwanja wa theluji' mweupe kwenye vilima vizima, ingawa picha za karibu zinaonyesha baadhi ya makoloni bado yana vitovu vya polipu vyenye rangi hata yanapoonekana meupe kabisa ukiwa mbali. Samaki nyota taji la miiba alipigwa picha moja kwa moja juu ya matumbawe yaliyopauka hapa, na makoloni machache yaliyotawanyika - bommie ya matawi ya kijani-mzeituni na dhahabu, matumbawe ya vifundo ya rangi ya samoni-machungwa - yalishikilia rangi kamili kama tofauti za wazi.
Tafsiri ya muhtasari huu kwa AI; Kiingereza ndicho kinachotumika rasmi.
22 independent survey stations shown with the program’s logo — click one to see how far it is from this site.
Six other CRD dive sites with their own pages within 5 km shown in orange — click a marker to open its page.
4 of the 20 photographs on this page are shown beside the text that discusses them under "Site description" below.
Water is clear and blue in the deeper wide frames and hazier and green-cast over the shallow reef flat. Relief is real: discrete bommies rising off sand with fish clouds over them, and between them broad low-relief hardground of turf, rubble, and coralline pavement.
The 72 reviewed frames show a shallow, high-cover coral garden of almost continuous knobby columnar coral, photographed while nearly all of it was white. The reef itself is dominated to an unusual degree by one growth form: dense, knobby-to-columnar coral in continuous hummocked sheets that run out of frame in every direction. About a third of the set (21 frames) is this one habitat. Anderson identified this coral as Galaxea in two of the frames: one is a wide shot of exactly this field, and another is a single colony of it in close-up with the polyps still extended; neither frame is among the four published here. Massive Porites is present as discrete lobate boulders rather than as the matrix, and meandroid Platygyra brains appear as isolated domes. Corymbose and digitate Acropora sit on the pavement between the Galaxea sheets, cauliflower-form Pocillopora is woven through, and Plerogyra bubble coral, foliose plate corals, and cream leather corals round out the assemblage. Three frames are the most colorful in the set, with pink and tan soft corals, red and yellow sponges, and gold crinoids among the pale coral. Between the coral, the pavement carries heavy turf and dark red fleshy macroalgae.
On bleaching the set is emphatic, and it is emphatic on structure, not just on color. One frame is a whole hillside of columnar coral gone uniformly white from the bottom of the frame to the ridgeline against open blue — a snowfield (e.g., Image 2).
A wide frame of the Galaxea field shows the same thing. The Galaxea sheets read white to pale gray-lavender across the wide frames, with whiteness carried unbroken across entire colony surfaces rather than in patches, which is the pattern of thermal bleaching rather than of shading or camera cast. The discrete taxa follow suit: one frame is a large Platygyra dome gone chalk-white with dead eroded depressions already opening on its upper surface; another is a meter-scale lobate Porites bleached pale gray-lavender with only small brown remnant patches; a third is a Plerogyra with every vesicle stark white; the close-up Galaxea is white with tentacles still fully expanded, i.e. alive and bleached rather than dead. Branching Acropora is the most absolutely white group in the set, and the cleanest evidence is within-frame contrast rather than absolute color: one frame is a single bone-white corymbose colony sitting inside a ring of dark red-brown fleshy macroalgae, and five others all show white branching colonies against dark turfed rock in the same exposure (e.g., Image 3).
Two close-ups explain why the published figure is 89% of tissue and not 100%. Both are macro views of the knobby coral in which each individual knob is bleached white or pale pink at its margins but still carries a dense gold-yellow polyp center. Tissue is present and partly pigmented at the polyp scale on colonies that read as fully white from a meter away. The same partial retention shows at colony scale in one frame, where paling mauve-white lobes sit beside knobs holding faint tan. A minority of the reef kept obvious pigment, and it is worth naming because it is the exception. One frame is an olive-and-gold branching bommie beside the diver, plainly pigmented in the same frame as pale surroundings. Another is a bommie of salmon-orange knobby colonies (e.g., Image 1).
A third is a dark gray-purple encrusting dome on otherwise pale pavement. A fourth is a dark red-brown foliose plate. One more frame is a broad field of cream-tan ruffled leather corals, and another a deep maroon soft coral on sand — both show soft corals holding color, while a pale nephtheid soft coral (which Anderson identified as a cauliflower soft coral) is white-pink throughout (e.g., Image 4), so bleaching of soft corals alongside the stony corals is only partly supported.
Crown-of-thorns predation is directly documented here in four frames. In every one the animal is draped directly onto white bleached coral, surrounded by pink fleshy macroalgae and red sponge — predation stacked on top of thermal stress. The frames are mutually consistent with one or two individuals photographed repeatedly rather than an outbreak, and should not be read as four animals. Outright mortality is in the set too. One frame, which Anderson labeled as dying coral, shows an elongate mound of fine branching coral being smothered by cyanobacteria. The bleached Platygyra dome has open dead patches. Typical recent thermal stress: mean annual maximum of 5.1 degree heating weeks (2021-2025, NOAA CRW; Tanzania virtual station, whose polygon covers the Kisite-Mpunguti area). Seawater here was an estimated 31.6°C during the survey (read from the TG7 underwater camera and not validated, per Mayfield 2025, Environments 12:276, Table 1; the Kenya survey-wide mean of 32.0°C matched the 1998 event), and NOAA's Kenya virtual station recorded a peak of 13.5 degree-heating weeks on 18 April 2024, a level not reached there before in records going back to 1985; the Tanzania virtual station that covers this reef peaked at 16.0 on 16 April 2024. For the 2024 Kenya survey as a whole, Mayfield (2025, Environments 12:276) estimated that in situ temperatures ran about 1.3°C above NOAA's, so that "nearly 22 DHWs may actually have transpired"; those in situ readings came from the TG7 underwater camera and have not been validated.
Other fauna recorded: a Phyllidia nudibranch, blue-gray with yellow tubercles, in three frames; a purple-and-orange Pseudoceros flatworm in three frames; a giant clam with a fully pigmented dark maroon mantle — notable because it held color while the corals around it did not; dense clouds of damselfish and orange anthias over the bommies; and butterflyfish over the reef top.
WCS Kenya surveyed a station named Kisite, 3.38 km away (data via MERMAID). Within 5 km, twenty independent stations recorded hard coral cover between 2008 and 2024: eight by benthic survey, station-year means of 0.0–53%, and twelve by MERMAID bleaching-protocol quadrats, station-year means of 20–56%; the nearest, WCS Kenya / WCS Tanzania via MERMAID at Mkwiro, 0.57 km away, read 29% in 2020.
Dived 21 Mar 2024 in Kisite Marine National Park during the 2024 Western Indian Ocean mass bleaching event. Surveys were run with REEFolution.
Two frames put a diver in the scene for scale.
| Method | Hard coral cover (%) | Photos (n) ± SE |
|---|---|---|
| Manual (published) | 45.5 | |
| CoralNet (published survey's own annotation) | 45.5 | n = 71 |
| In-house DINOv3 | 36.1 | n = 71 |
| CoralSCOP unedited | 17.9 | n = 50 |
The three computer-vision methods disagree by 27.6 pp (17.9–45.5%) and read 9.4–27.6 pp below the manual point count (45.5%), except one that matches it; the headline is the manual point count because a person's point count of the site's photographs is the reference the models are measured against.
See a more detailed, stand-alone version of this table.
| Agency / program | Year(s) | Stations / distance | Link |
|---|---|---|---|
| McClanahan et al. (1996) | 1996 | 2 stations, 3.96–4.62 km | Records ↓ |
| REEFolution Foundation | 2017–2023 | 7 stations, 1.29–4.96 km | Records ↓ |
| submitted to MERMAID by Kosgei J, Musembi P.* (MERMAID bleaching-protocol quadrats) | 2024 | 1 station, 4.88 km | Records ↓ |
| WCS Kenya / WCS Tanzania via MERMAID | 2020 | 1 station, 0.57 km | Records ↓ |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | 2008–2019 | 11 stations, 0.81–4.89 km | Records ↓ |
Coral Reef DiagnosticsYear-average (illustrative only, programs differ; quadrats left out)Within 5 km, 20 independent survey stations recorded hard coral cover in 94 surveys between 2008 and 2024. Of the 6 stations with benthic surveys in more than one year, 3 declined (by 2.4–8.0 points) and 3 increased (by 1.0–21 points) between their first and latest surveys. Two stations share the longest span (2018–2023); one, Kikuyu House (REEFolution Foundation, 4.96 km away), went from 31% in 2018 (mean of 9 surveys) to 23% in 2023 (mean of 2 surveys). With MERMAID bleaching-protocol quadrats, of the 3 stations surveyed in more than one year, 3 increased (by 3.0–9.0 points) between their first and latest surveys. Since 2021, station-year means excluding quadrats average 25% (range 23–29%; n = 3 station-years from 9 surveys). Quadrats since 2021 read 36% (n = 1 station-year). This site's own estimate (46%) sits 5 points above the range of these station-year means up to 2 km away excluding quadrats (0.0–41%); the methods differ, so the comparison is context, not a like-for-like test. Quadrats up to 2 km away read 32%. 2 further rows in the table have no survey date, so they are listed but not part of this summary.
Collected by other programs using different methods (MERMAID is a data platform: each MERMAID row names the organization that did the survey, and its method is in the row's hover text. *Conducted by citizen scientists), so these are context for the figures above, not a like-for-like comparison. Where a station was surveyed more than once, the cell shows either the range of its values or, as a single value, the mean of surveys made in one year. Station names are not dive-site names.
| Agency | Site / location | Date | Hard coral cover (%) | Distance | Link |
|---|---|---|---|---|---|
| McClanahan et al. (1996) | Kisite Island | by 1996 (published) | 27% (2 records) | 3.96 km | doi:10.1046/j.1523-1739.1996.10010136.x |
| McClanahan et al. (1996) | Kisite Island | by 1996 (published) | 19% | 4.62 km | doi:10.1046/j.1523-1739.1996.10010136.x |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite | 2008–2009 | 37–46% (2 surveys) | 3.38 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite South of Site 1 | 2010 | 56% | 3.49 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite 1 | 2012–2016 | 44–48% (3 surveys) | 3.38 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite 2 | 2012–2015 | 44–52% (2 surveys) | 3.94 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite Edge 1 | 2013 | 42% | 2.83 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite Edge 2 | 2013 | 21% | 4.58 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Jiwe la kale East | 2014 | 25% | 4.80 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Mji wa Kale 2 (Mkwiro) | 2015 | 20% | 4.89 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Mpunguti | 2016 | 32% | 0.81 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Kisite corner | 2016 | 50% | 2.83 km | Darling E. 2018. Kenya CRCP legacy. MERMAID |
| REEFolution Foundation | Dolphin Point | 2017–2019 | 20–41% (range of yearly means; 14 surveys) | 1.29 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Lower Mpunguti | 2017–2019 | 0.0–8.0% (range of yearly means; 15 surveys) | 1.45 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Outer Kisite | 2017–2019 | 39–53% (range of yearly means; 13 surveys) | 2.82 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Kisite 2 | 2017–2018 | 29–48% (range of yearly means; 3 surveys) | 3.94 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Kisite Edge 2 | 2017 | 15% | 4.58 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Kikuyu House | 2018–2023 | 23–31% (range of yearly means; 24 surveys) | 4.96 km | 2023. REEFolution Kenya. MERMAID |
| REEFolution Foundation | Mkwiro CMA | 2018–2023 | 29–37% (range of yearly means; 7 surveys) | 4.96 km | 2023. REEFolution Kenya. MERMAID |
| WCS Kenya via MERMAID (MERMAID bleaching-protocol quadrats) | Mji wa Kale 2 (Mkwiro) | 2019 | 24% | 4.89 km | Darling E, Kosgei J, McClanahan T, Muthiga N. 2019. Kenya MACMON 2016-17. MERMAID |
| WCS Kenya / WCS Tanzania via MERMAID | Mkwiro | 2020 | 29% | 0.57 km | Darling E, Mensa J, O'Leary J, Schwarz A. 2020. BAF 1 - 2020. MERMAID |
| submitted to MERMAID by Kosgei J, Musembi P.* (MERMAID bleaching-protocol quadrats) | Mji wa Kale 1 (Mkwiro) | 2024 | 36% | 4.88 km | Kosgei J, Musembi P. 2024. KenyaBleachingSurveys_2024. MERMAID |
All images from Coral Reef Diagnostics. Data are from Coral Reef Diagnostics and the organizations named in the data sources above.
© Coral Reef Diagnostics.