Kenya - Chipopo (Pate [Lamu]) snorkel

Setting

Water quality is not uniform across the pass: the tree frames early in the run are green and particle-laden with the structure fading into murk within a few meters, while the later frames over hardground and the wide tree shot are appreciably clearer and blue-green.

General benthic features

What the photographs show first is infrastructure. Multi-tiered rope-and-rebar nursery trees carry fragments on short droppers from every cross-arm, and separate steel and concrete outplant tables sit on sand nearby (e.g., Image 3).

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One steel outplant frame carries no coral at all — bare, algae-filmed metal over sand (photographed at 10:48) — and another frame shows a table with just two small fragments on it, so the array is not uniformly stocked (e.g., Image 4).

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The natural benthos around the array is thinly but genuinely documented, and it is not simply sand. Low hardground boulders carry dense red-brown fleshy macroalgae and turf with coral colonies emerging from it. One dense natural patch is a single boulder carrying orange-brown encrusting and submassive colonies that are clearly pigmented, with a bleached white meandroid brain coral (Platygyra-type) on its upper surface.

Coral cover

• Reference: Mayfield (2025)
• Data file: (Mayfield, 2025-Supplemental File S1)
• CoralNet submission package (accession #4963)
• Coral cover 13% — and 76% of hard coral tissue bleached (March-April 2024).
• Measured from 40 white-balanced photographs taken at this site during the 2024 Western Indian Ocean mass bleaching event and point-annotated in CoralNet, published in Mayfield, A.B. (2025) A Citizen Science Approach for Documenting Mass Coral Bleaching in the Western Indian Ocean. Environments 12(8):276. doi:10.3390/environments12080276, Supplemental File S1 (May 2025 analysis).
• This is a published, human-supervised photo point-annotation value, not a computer vision estimate.
• Read it as a restoration-site number: the frames it was drawn from are dominated by nursery hardware over sand, so the figure partly measures how much coral has been put here rather than what the reef grew on its own.
• It also counts bleached coral as coral — at the moment of the survey roughly three-quarters of that small standing stock was white.

Stressors

Bleaching is the dominant signal and it is unambiguous on structure, not just on color. On the nursery trees the majority of hanging fragments are chalk-white with crisp, unfouled branch tips (one frame holds roughly a dozen white fragments to three or four pigmented ones; another shows a whole tree of white fragments and nothing else). The tables are the same: one table has about ten stark-white branching fragments in a single frame against one or two cream-tan ones, and four more frames each repeat the pattern with five or six white fragments to one gold-tan holdout (e.g., Image 1).

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The clearest single piece of evidence is a frame where a thumbs-down gesture is held between two branching colonies on the same beam: one gold-tan and pigmented, the immediately adjacent one bone-white. That within-frame contrast is what the bleaching call rests on, and it survives any color adjustment. A real pigmented minority does persist on the structures, concentrated on the shorter, tighter branching stock rather than the fine staghorn Acropora: rust-orange to gold-brown clusters recur in six frames, and a gold-tan branching colony with humbug damselfish sheltering in it sits on a concrete beam. Whether all of that rust-brown is living pigment rather than algal fouling on dead skeleton cannot be settled from color-adjusted frames, and it should not be over-read. Several massive corals here held their pigment: a salmon-orange lobate Porites beside a paler coarse-textured massive colony, a knobby tan-gold Porites-type bommie with pink coralline and sponges around its base, tan-brown massive domes in two frames, and a strikingly green massive colony with large corallites that Anderson singled out for a thumbs-up. Others did not: one frame shows a meter-scale multi-lobed massive Porites bleached chalk-white from base to crown with a faint lilac cast, another shows a second white dome on macroalgal rock, and a third shows two more white lobate colonies. Partial mortality is visible, which matters because it is a step beyond paling. The crown of the big bleached Porites carries a discrete khaki-green algal-filmed patch and a rust-brown streak down its flank where tissue has gone (e.g., Image 15), verified at full resolution; another frame shows a comparable filmed patch on a second dome (e.g., Image 14); and one frame — a hand pointing at a single outplant plug — shows a pale, polyp-extended colony ( Goniopora -type) whose entire center is overgrown with green filamentous algae while its margins are still pale living tissue (e.g., Image 21).

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So the site is not purely at the peak-paling stage: some tissue was already lost by 3 April. No crown-of-thorns starfish and no disease lesions appear anywhere in the 45 frames. Seawater here was an estimated 32.0°C during the survey (read from the TG7 underwater camera and not validated, per Mayfield 2025, Environments 12:276, Table 1; the Kenya survey-wide mean of 32.0°C matched the 1998 event), and NOAA recorded a peak of 13.5 degree-heating weeks on 18 April 2024, the highest for Kenya since records began in 1985. For the 2024 Kenya survey as a whole, Mayfield (2025, Environments 12:276) estimated that in situ temperatures ran about 1.3°C above NOAA's, so that "nearly 22 DHWs may actually have transpired"; those in situ readings came from the TG7 underwater camera and have not been validated.

Fish and other fauna

Fish life on and around the array is conspicuous and the structure is plainly working as habitat regardless of the state of the coral on it. Dense aggregations of snapper- and emperor-type fish crowd the trees, schools of yellow bluestripe snapper (Lutjanus kasmira) with dark surgeonfish behind work the tables, and a loose school of blue-green parrotfish passes through in another frame. The single best fish sighting was a dark-bodied terminal-phase parrotfish with vivid blue and red fins and flank stripes swimming through the hanging bleached fragments. Also recorded: humbug damselfish in a gold Pocillopora-type colony, blue-purple surgeonfish and fusiliers over a table, a rabbitfish and butterflyfish, and a bright blue-green parrotfish over the outplant table. Invertebrates are sparse but include one clear highlight — a gray-blue pentagonal cushion star (Culcita) sitting in a shaded bay of a concrete outplant table surrounded by bleached fragments (verified at full resolution) — plus orange encrusting sponges on the frames, mauve and lilac encrusting patches on the concrete, and mauve-pink nubbin colonies set into the table itself (e.g., Image 2).

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Comparisons with other data

Apart from our own published survey shown here, we found no other surveys at this site as of 2026. If you would like to share yours, please email us.

Dive record

Snorkeled 3 April 2024 off Pate Island in the Lamu archipelago, northern Kenya, during the 2024 Western Indian Ocean mass bleaching event. The 45 reviewed frames (of 47 on file) run 10:41 to 11:06 — one continuous working pass over a coral-restoration site. Surveys were run with the Pate Marine Community Conservancy and the Northern Rangelands Trust.

Other notes

Pate, at the northern end of the Kenya series, is documented here by 45 of the 47 frames on file. They document a nursery and outplant array in detail and the reef immediately around it in outline. They do not document a reef traverse, a depth profile, or anything beyond a few tens of meters of the array, and nothing on this page should be read as a statement about the wider Lamu reef system. Two frames show a spherical mooring buoy heavily fouled with red-brown algae and carrying two small pale coral colonies growing on it — settlement on floating hardware, which is worth noting at a restoration site.